miRBase entry: spn-mir-1720

Stem-loop spn-mir-1720


Accession
MI0049584
Description
Sphenodon punctatus spn-mir-1720 precursor miRNA


Sequence


gcgggcugcugggcacuccuacuauguuucCGAUCACCUCGGUUGUUGCUUUUgugagugucacacaggaAAGCAACGAGAGGGCAGGUCUGGaacgucuauccaugucggccagagaaaagu
...((((((((((..........(((((((.((((.((((..(((((((((((.((.((...)).)).)))))))))))))))...)))).)))))))...)))).).)))))..........

Structure
-------gcg     - -    cacuccuacu       C    --A    GG           g  a  g 
          ggcug c uggg          auguuuc GAUC   CCUC  UUGUUGCUUUU ug gu  
          ||||| | ||||          ||||||| ||||   ||||  ||||||||||| || || u
          ccggc g accu          ugcaaGG CUGG   GGAG  AGCAACGAAag ac ca  
ugaaaagaga     u u    -------auc       U    ACG    --           g  a  c 


Annotation confidence Not enough data
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Genome context
QEPC01014402.1: 9130413-9130475 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from spn-mir-1720
Name Accession Chromosome Start End Strand Confidence




Database links

Mature spn-miR-1720-5p

Accession MIMAT0077136
Description Sphenodon punctatus spn-miR-1720-5p mature miRNA
Sequence 31 - CGAUCACCUCGGUUGUUGCUUUU - 53
Evidence not_experimental

Mature spn-miR-1720-3p

Accession MIMAT0077137
Description Sphenodon punctatus spn-miR-1720-3p mature miRNA
Sequence 71 - AAGCAACGAGAGGGCAGGUCUGG - 93
Evidence not_experimental

References