miRBase entry: spn-mir-216

Stem-loop spn-mir-216


Accession
MI0049623
Description
Sphenodon punctatus spn-mir-216 precursor miRNA


Sequence


cggcacaaccuggauggcugcgaaugggcuUAAUCUCAGCUGGCAACUGUGAGcaguuaauaaauuaucuCACAGUGGUAUCUGGGAUUAUGcuaaacacagcaauugcacugcucuagcgg
.((.....))..(((.((((.(....(((.(((((((((.((.((.(((((((.((((....))))..))))))))).)).))))))))).)))...).)))).)))...((((....))))

Structure
---cggcacaaccug   g    c aaug   u         C  G  A       -c    a 
               gau gcug g    ggc UAAUCUCAG UG CA CUGUGAG  aguu a
               ||| |||| |    ||| ||||||||| || || |||||||  ||||  
               uua cgac c    ucG AUUAGGGUC AU GU GACACuc  uuaa u
ggcgaucucgucacg   a    a -aaa   U         U  G  -       ua    a 


Annotation confidence Not enough data
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Genome context
QEPC01007720.1: 928552-928613 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from spn-mir-216
Name Accession Chromosome Start End Strand Confidence




Database links

Mature spn-miR-216-5p

Accession MIMAT0077211
Description Sphenodon punctatus spn-miR-216-5p mature miRNA
Sequence 31 - UAAUCUCAGCUGGCAACUGUGAG - 53
Evidence not_experimental

Mature spn-miR-216-3p

Accession MIMAT0077212
Description Sphenodon punctatus spn-miR-216-3p mature miRNA
Sequence 71 - CACAGUGGUAUCUGGGAUUAUG - 92
Evidence not_experimental

References