miRBase entry: spn-mir-194b

Stem-loop spn-mir-194b


Accession
MI0049639
Description
Sphenodon punctatus spn-mir-194b precursor miRNA


Sequence


gauguuugcacaacuggggugcuuaucugcUGUAACAGCAACUCCAUGUGGAAgucucuggccugguuCCAGUGGGGCGGCUGUUAUUUUggaugggcacucgggagcaucagauggggc
((((((.......((.((((((((((((...((((((((..((((((.(((((.((........)))))))))))))..))))))))...)))))))))))).)))))))).........

Structure
---------      ugcacaa  g            gcU        AA      G     g  ucu 
         gauguu       cu gggugcuuaucu   GUAACAGC  CUCCAU UGGAA uc   g
         ||||||       || ||||||||||||   ||||||||  |||||| ||||| ||    
         cuacga       gg cucacggguagg   UAUUGUCG  GGGGUG ACCuu gg   g
cgggguaga      -------  g            UUU        GC      -     -  ucc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
QEPC01015260.1: 384821-384880 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from spn-mir-194b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature spn-miR-194b-5p

Accession MIMAT0077240
Description Sphenodon punctatus spn-miR-194b-5p mature miRNA
Sequence 31 - UGUAACAGCAACUCCAUGUGGAA - 53
Evidence not_experimental

Mature spn-miR-194b-3p

Accession MIMAT0077241
Description Sphenodon punctatus spn-miR-194b-3p mature miRNA
Sequence 69 - CCAGUGGGGCGGCUGUUAUUUU - 90
Evidence not_experimental

References