miRBase entry: spn-mir-194a

Stem-loop spn-mir-194a


Accession
MI0049640
Description
Sphenodon punctatus spn-mir-194a precursor miRNA


Sequence


aaucaagauuaccgagacagugcugucaagUGUAACAGCAACUCCAUGUGGACugcguauacuuCCAGUGGAGAUGCUGUUACUUUugaaagacaccgacagacuaugaagcagcc
...................(((((.(((((.(((((((((.((((((.((((...........)))))))))).))))))))).))))).)).)))....................

Structure
-aaucaagauuaccgagaca   -  g     U         A      G    Cugc 
                    gug cu ucaag GUAACAGCA CUCCAU UGGA    g
                    ||| || ||||| ||||||||| |||||| ||||    u
                    cac ga aguUU CAUUGUCGU GAGGUG ACCu    a
ccgacgaaguaucagacagc   a  a     U         A      -    ucau 


Annotation confidence Not enough data
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Genome context
QEPC01005170.1: 340064-340119 []
Clustered miRNAs
1 other miRNA is < 10 kb from spn-mir-194a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature spn-miR-194a-5p

Accession MIMAT0077242
Description Sphenodon punctatus spn-miR-194a-5p mature miRNA
Sequence 31 - UGUAACAGCAACUCCAUGUGGAC - 53
Evidence not_experimental

Mature spn-miR-194a-3p

Accession MIMAT0077243
Description Sphenodon punctatus spn-miR-194a-3p mature miRNA
Sequence 65 - CCAGUGGAGAUGCUGUUACUUU - 86
Evidence not_experimental

References