miRBase entry: spn-mir-193a

Stem-loop spn-mir-193a


Accession
MI0049644
Description
Sphenodon punctatus spn-mir-193a precursor miRNA


Sequence


augaccuucugaaaguugugguuccagauuCGGGGUUUUGGGGGCAAGAUGagcuuaugauuuauccAACUGGCCCACAAAGUCCCGCUuuugguggucacuuuguucugcaaaagaaa
..........(((....((((..(((((..(((((((((((((.((.(((((((....).))))))....)).))).))))))))))..)))))...))))....)))...........

Structure
-augaccuucu   aguu    -uu     uu          -   G  ---A      - u 
           gaa    gugg   ccaga  CGGGGUUUUG GGG CA    GAUGag c u
           |||    ||||   |||||  |||||||||| ||| ||    |||||| |  
           cuu    cacu   gguuu  GCCCUGAAAC CCC GU    cuauuu g a
aaagaaaacgu   guuu    ggu     UC          A   G  CAAc      a u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
QEPC01007559.1: 13485014-13485072 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from spn-mir-193a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature spn-miR-193a-5p

Accession MIMAT0077251
Description Sphenodon punctatus spn-miR-193a-5p mature miRNA
Sequence 31 - CGGGGUUUUGGGGGCAAGAUG - 51
Evidence not_experimental

Mature spn-miR-193a-3p

Accession MIMAT0077250
Description Sphenodon punctatus spn-miR-193a-3p mature miRNA
Sequence 68 - AACUGGCCCACAAAGUCCCGCU - 89
Evidence not_experimental

References