miRBase entry: spn-mir-153-1

Stem-loop spn-mir-153-1


Accession
MI0049660
Description
Sphenodon punctatus spn-mir-153-1 precursor miRNA


Sequence


uauuuugccagcuaauuagcgguugccagugUCAUUUUUGUGAUGUUGCAGCUaguaauaugagcccagUUGCAUAGUCACAAAAGUGAUCauuggaaacugugacucugcugcagggaca
...(((((.(((......((((((.(((((((((((((((((((..(((((((.((.......))..)))))))..))))))))))))).)))))).))))))......))))))))....

Structure
-uau     c   uaauua      g      -             GU       -a  aa 
    uuugc agc      gcgguu ccagug UCAUUUUUGUGAU  UGCAGCU  gu  u
    ||||| |||      |||||| |||||| |||||||||||||  |||||||  ||  a
    ggacg ucg      ugucaa gguuaC AGUGAAAACACUG  ACGUUga  cg  u
acag     -   ucucag      a      U             AU       cc  ag 


Annotation confidence Not enough data
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Genome context
QEPC01002394.1: 550573-550633 []
Clustered miRNAs
1 other miRNA is < 10 kb from spn-mir-153-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature spn-miR-153-5p

Accession MIMAT0077278
Description Sphenodon punctatus spn-miR-153-5p mature miRNA
Sequence 32 - UCAUUUUUGUGAUGUUGCAGCU - 53
Evidence not_experimental

Mature spn-miR-153-3p

Accession MIMAT0077277
Description Sphenodon punctatus spn-miR-153-3p mature miRNA
Sequence 70 - UUGCAUAGUCACAAAAGUGAUC - 91
Evidence not_experimental

References