Stem-loop spn-mir-133b

Accession

MI0049683

Description

Sphenodon punctatus spn-mir-133b precursor miRNA

Sequence

agaugucgagaggagcugcacucugcucugGCUGGUCAAACGGAACCAAGUCcgucuucccuggaggUUUGGUCCCCUUCAACCAGCUAcagcagugcugaaaucgucccgcggcgccc
....((((.((.((...(((((..(((.((((((((..((.((.((((((.((.((......)).)))))))).)).))..)))))))).)))))))).....)).))...))))....

Structure

agau    --a  g  --gcu     cu   c        CA  C  A      U  g  uu 
    gucg   ga ga     gcacu  gcu ugGCUGGU  AA GG ACCAAG Cc uc  c
    ||||   || ||     |||||  ||| ||||||||  || || |||||| || ||   
    cggc   cu cu     cguga  cga AUCGACCA  UU CC UGGUUU gg gg  c
cccg    gcc  g  aaagu     --   c        AC  C  C      -  a  uc 

Annotation confidence Not enough data

Genome context

QEPC01009246.1: 3255842-3255900 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from spn-mir-133b

Mature spn-miR-133b-5p

• Accession: MIMAT0077321
• Description: Sphenodon punctatus spn-miR-133b-5p mature miRNA
• Sequence: 31 - GCUGGUCAAACGGAACCAAGUC - 52
• Evidence: not_experimental

Mature spn-miR-133b-3p

• Accession: MIMAT0077320
• Description: Sphenodon punctatus spn-miR-133b-3p mature miRNA
• Sequence: 68 - UUUGGUCCCCUUCAACCAGCUA - 89
• Evidence: not_experimental

References