miRBase entry: spn-mir-212

Stem-loop spn-mir-212


Accession
MI0049685
Description
Sphenodon punctatus spn-mir-212 precursor miRNA


Sequence


ggugagaagaccccaagucagugcaucggcACCUUGGCUCUAGACUGCUUACUgcuacgaagcauuaaggaaacagUAACAGUCUACAGUCAUGGCUAcugaagcaugacagguacagcgucugcgcc
((((...(((((((..((((.(((.((((..((.(((((.(((((((.((((((...(..........)....))))))))))))).))))).))...)))).))))))).))....).)))).))))

Structure
    aga    - ----  aa    g   a    -cA  U     C       C      -cua gaag 
ggug   agac c    cc  guca ugc ucgg   CC UGGCU UAGACUG UUACUg    c    c
||||   |||| |    ||  |||| ||| ||||   || ||||| ||||||| ||||||    |     
ccgc   ucug g    gg  cagu acg aguc   GG ACUGA AUCUGAC AAUgac    g    a
    --g    c acau  -a    -   a    AUC  U     C       -      aaag aauu 


Annotation confidence Not enough data
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Genome context
QEPC01008384.1: 3145928-3145995 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from spn-mir-212
Name Accession Chromosome Start End Strand Confidence




Database links

Mature spn-miR-212-5p

Accession MIMAT0077322
Description Sphenodon punctatus spn-miR-212-5p mature miRNA
Sequence 31 - ACCUUGGCUCUAGACUGCUUACU - 53
Evidence not_experimental

Mature spn-miR-212-3p

Accession MIMAT0077323
Description Sphenodon punctatus spn-miR-212-3p mature miRNA
Sequence 77 - UAACAGUCUACAGUCAUGGCUA - 98
Evidence not_experimental

References