Stem-loop spn-mir-449b

Accession

MI0049718

Description

Sphenodon punctatus spn-mir-449b precursor miRNA

Sequence

uggagggcuggcuuucuguguguggugauuAGGCAGUGUAUUGUUAGUUUGCUGuugcucacauuccaGCAACUAAAUACACUGCCACAuuagcacagcaugucugccucauugcuuag
....((((.(((...((((((.(((((....(((((((((((..(((((.((((.((....))...)))))))))))))))))))).)))))))))))...))).))))..........

Structure

------ugga    u   uuu      g     auuA           GU     U    --u  c 
          gggc ggc   cugugu uggug    GGCAGUGUAUU  UAGUU GCUG   ug u
          |||| |||   |||||| |||||    |||||||||||  ||||| ||||   ||  
          uccg cug   gacacg auuAC    CCGUCACAUAA  AUCAA CGac   ac c
gauucguuac    u   uac      -     ---A           --     -    cuu  a 

Annotation confidence Not enough data

Genome context

QEPC01012145.1: 2529985-2530043 []

Clustered miRNAs

1 other miRNA is < 10 kb from spn-mir-449b

Mature spn-miR-449b-5p

• Accession: MIMAT0077377
• Description: Sphenodon punctatus spn-miR-449b-5p mature miRNA
• Sequence: 31 - AGGCAGUGUAUUGUUAGUUUGCUG - 54
• Evidence: not_experimental

Mature spn-miR-449b-3p

• Accession: MIMAT0077378
• Description: Sphenodon punctatus spn-miR-449b-3p mature miRNA
• Sequence: 69 - GCAACUAAAUACACUGCCACA - 89
• Evidence: not_experimental

References