miRBase entry: spn-mir-449a

Stem-loop spn-mir-449a


Accession
MI0049719
Description
Sphenodon punctatus spn-mir-449a precursor miRNA


Sequence


agcaugguuuguuaggugugugugacgggaUGGCAGUGUAUCGUUAGCUGGUuguaaagcuuaaggacacCAGCUAACAUGCAGCUGCUCUCcuguugcacaugcuuuauucaucaaacugg
.....((((((..(((((((((((((((((.((((((((((.((((((((((.((...........))))))))))))))))).))))).))))))))))))))))).......))))))..

Structure
agcau      -----uu                 U     -     C          u  aaag 
     gguuug       aggugugugugacggga GGCAG UGUAU GUUAGCUGGU gu    c
     ||||||       ||||||||||||||||| ||||| ||||| |||||||||| ||    u
     ucaaac       uucguacacguugucCU UCGUC ACGUA CAAUCGACca ca    u
---gg      uacuuau                 C     G     -          -  ggaa 


Annotation confidence Not enough data
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Genome context
QEPC01012145.1: 2531952-2532013 []
Clustered miRNAs
1 other miRNA is < 10 kb from spn-mir-449a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature spn-miR-449a-5p

Accession MIMAT0077379
Description Sphenodon punctatus spn-miR-449a-5p mature miRNA
Sequence 31 - UGGCAGUGUAUCGUUAGCUGGU - 52
Evidence not_experimental

Mature spn-miR-449a-3p

Accession MIMAT0077380
Description Sphenodon punctatus spn-miR-449a-3p mature miRNA
Sequence 71 - CAGCUAACAUGCAGCUGCUCUC - 92
Evidence not_experimental

References