miRBase entry: spn-mir-30a

Stem-loop spn-mir-30a


Accession
MI0049732
Description
Sphenodon punctatus spn-mir-30a precursor miRNA


Sequence


ucaagaugaugaugucuaguagucuguagcUGUAAACAUCCCCGACUGGAAGCUguaagagaaauuuuagCUUUCAGUCAGAUGUUUGCUGCgacuggcuauucgugaacgucugaaggaaa
(((.((((.(.(((..((((((((.(((((...(((((((...((((((((((((.((......)).)))))))))))).)))))))))))))))).))))..))).).)))))))......

Structure
------   a    a g   uc    -    u     UGU       CCC            u  ga 
      uca gaug u aug  uagu aguc guagc   AAACAUC   GACUGGAAGCUg aa  g
      ||| |||| | |||  |||| |||| |||||   |||||||   |||||||||||| ||   
      agu cugc a ugc  aucg ucag CGUCG   UUUGUAG   CUGACUUUCgau uu  a
aaagga   -    a g   uu    g    -     ---       --A            u  aa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
QEPC01012160.1: 1443054-1443115 []
Clustered miRNAs
1 other miRNA is < 10 kb from spn-mir-30a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature spn-miR-30a-5p

Accession MIMAT0077404
Description Sphenodon punctatus spn-miR-30a-5p mature miRNA
Sequence 31 - UGUAAACAUCCCCGACUGGAAGCU - 54
Evidence not_experimental

Mature spn-miR-30a-3p

Accession MIMAT0077405
Description Sphenodon punctatus spn-miR-30a-3p mature miRNA
Sequence 71 - CUUUCAGUCAGAUGUUUGCUGC - 92
Evidence not_experimental

References