miRBase entry: spn-mir-29b-1

Stem-loop spn-mir-29b-1


Accession
MI0049734
Description
Sphenodon punctatus spn-mir-29b-1 precursor miRNA


Sequence


cacaggucccaguaaccccuuuagaggaugACUGAUUUCUUUUGGUGUUCAGAgucaauaccacuuucUAGCACCAUUUGAAAUCGGUUAuagugauuggggauuagcagcaugggcgcc
....(((((((((((((((.(((....((((((((((((...(((((((.((((...........)))))))))))...))))))))))))..)))..)))).))....)).)))).)))

Structure
caca   -    -  ----  -    -u   gagg            UUU       C    ucaa 
    ggu ccca gu    aa cccc  uua    augACUGAUUUC   UGGUGUU AGAg    u
    ||| |||| ||    || ||||  |||    ||||||||||||   ||||||| ||||    a
    ccg gggu cg    uu gggg  agu    uAUUGGCUAAAG   ACCACGA Ucuu    c
----   c    a  acga  a    uu   --ga            UUU       -    ucac 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
QEPC01011928.1: 45622-45681 []
Clustered miRNAs
1 other miRNA is < 10 kb from spn-mir-29b-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature spn-miR-29b-1-5p

Accession MIMAT0077408
Description Sphenodon punctatus spn-miR-29b-1-5p mature miRNA
Sequence 31 - ACUGAUUUCUUUUGGUGUUCAGA - 53
Evidence not_experimental

Mature spn-miR-29b-3p

Accession MIMAT0077406
Description Sphenodon punctatus spn-miR-29b-3p mature miRNA
Sequence 69 - UAGCACCAUUUGAAAUCGGUUA - 90
Evidence not_experimental

References