miRBase entry: spn-mir-29a-2

Stem-loop spn-mir-29a-2


Accession
MI0049735
Description
Sphenodon punctatus spn-mir-29a-2 precursor miRNA


Sequence


aguaacuacaaagcaaaucuuccucuggaAGCUGGUUUCACAUGGUGGCUUAGAuuuucccaucuuuguaucUAGCACCAUUUGAAAUCAGUGUUcuaggagcaagaauuacagcacuggaagug
....(((.((..((((.((((.((((((((((((((((((.((((((.((.((((..............)))))))))))).)))))))))).))))).))).)))).))...))..))..))).

Structure
agua   -a  aa  ---  a    c   -     -          C      G  U    uuuccc 
    acu  ca  gc   aa ucuu cuc uggaA GCUGGUUUCA AUGGUG CU AGAu      a
    |||  ||  ||   || |||| ||| ||||| |||||||||| |||||| || ||||       
    uga  gu  cg   uu agaa gag aucUU UGACUAAAGU UACCAC GA Ucua      u
---g   ag  ca  aca  a    c   g     G          U      -  -    uguuuc 


Annotation confidence Not enough data
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Genome context
QEPC01001425.1: 3117670-3117734 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from spn-mir-29a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature spn-miR-29a-2-5p

Accession MIMAT0077410
Description Sphenodon punctatus spn-miR-29a-2-5p mature miRNA
Sequence 30 - AGCUGGUUUCACAUGGUGGCUUAGA - 54
Evidence not_experimental

Mature spn-miR-29a-3p

Accession MIMAT0077409
Description Sphenodon punctatus spn-miR-29a-3p mature miRNA
Sequence 73 - UAGCACCAUUUGAAAUCAGUGUU - 95
Evidence not_experimental

References