miRBase entry: spn-mir-19a

Stem-loop spn-mir-19a


Accession
MI0049747
Description
Sphenodon punctatus spn-mir-19a precursor miRNA


Sequence


cuguagcuuucuacuuugcaguccucuguuAGUUUUGCAUAGUUGCACUACaagaagaauguaguUGUGCAAAUCUAUGCAAAACUGAuuguggccuguuauugucuacaucaagaag
.(((((......((...((((.((.(.(((((((((((((((((((((((((.......))))...))))))..))))))))))))))).).)).))))....)))))))........

Structure
-------c     cuuucu  -uuu    u  u u               --      ---    ag 
        uguag      ac    gcag cc c guuAGUUUUGCAUAG  UUGCAC   UACa  a
        |||||      ||    |||| || | |||||||||||||||  ||||||   ||||  a
        acauc      ug    uguc gg g uAGUCAAAACGUAUC  AACGUG   augu  g
gaagaacu     ------  uuau    c  u u               UA      Uug    aa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
QEPC01001394.1: 2547937-2547994 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from spn-mir-19a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature spn-miR-19a-5p

Accession MIMAT0077430
Description Sphenodon punctatus spn-miR-19a-5p mature miRNA
Sequence 31 - AGUUUUGCAUAGUUGCACUAC - 51
Evidence not_experimental

Mature spn-miR-19a-3p

Accession MIMAT0077429
Description Sphenodon punctatus spn-miR-19a-3p mature miRNA
Sequence 66 - UGUGCAAAUCUAUGCAAAACUGA - 88
Evidence not_experimental

References