miRBase entry: spn-mir-18b

Stem-loop spn-mir-18b


Accession
MI0049750
Description
Sphenodon punctatus spn-mir-18b precursor miRNA


Sequence


uccaaucugcauugcaaauggcccucgugcUAAGGUGCAUCUAGUGCAGUUAGugaaguagcuuagaaucUACUGCCCUGAAUGCUCCUUCUGGCaugagcuccucgcugugcgucuugcugcac
..(((..(((((.((....((..((((((((((((.((((.(((.(((((.((................))))))).))).)))).)))..)))))))))..))..)).)))))..)))......

Structure
----uc   uc     u  aaau  cc         --   U    C   U     U  ugaagua 
      caa  ugcau gc    gg  cucgugcUA  AGG GCAU UAG GCAGU AG       g
      |||  ||||| ||    ||  |||||||||  ||| |||| ||| ||||| ||        
      guu  gcgug cg    cc  gaguaCGGU  UCC CGUA GUC CGUCA Uc       c
cacguc   cu     u  --cu  uc         CU   U    A   C     -  uaagauu 


Annotation confidence Not enough data
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Genome context
QEPC01011901.1: 25208168-25208232 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from spn-mir-18b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature spn-miR-18b-5p

Accession MIMAT0077435
Description Sphenodon punctatus spn-miR-18b-5p mature miRNA
Sequence 31 - UAAGGUGCAUCUAGUGCAGUUAG - 53
Evidence not_experimental

Mature spn-miR-18b-3p

Accession MIMAT0077436
Description Sphenodon punctatus spn-miR-18b-3p mature miRNA
Sequence 71 - UACUGCCCUGAAUGCUCCUUCUGGC - 95
Evidence not_experimental

References