Stem-loop spn-mir-18a

Accession

MI0049751

Description

Sphenodon punctatus spn-mir-18a precursor miRNA

Sequence

gugcgaugugauguugagugcuuuuuguucUAAGGUGCAUCUAGUGCAGAUAGugaaguagauuagcaucuACUGCCCUAAGUGCUCCUUCUGGCauaagaaguuauguucucauccagucacuc
(((...((.((((..((..(((((((((.((((((.((((.(((.((((.(((((..(.....)..)).))))))).))).)))).)))..))).)))))))))....))..))))))..)))..

Structure

--   cga  u    uu  --gu         u   --   U    C   U    A   -  aa u 
  gug   ug gaug  ga    gcuuuuugu cUA  AGG GCAU UAG GCAG UAG ug  g a
  |||   || ||||  ||    ||||||||| |||  ||| |||| ||| |||| ||| ||  | g
  cac   ac cuac  uu    ugaagaaua GGU  UCC CGUG AUC CGUC Auc ac  u a
cu   -ug  -    uc  guau         C   CU   U    A   C    -   u  ga u 

Annotation confidence Not enough data

Genome context

QEPC01001394.1: 2547787-2547851 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from spn-mir-18a

Mature spn-miR-18a-5p

• Accession: MIMAT0077437
• Description: Sphenodon punctatus spn-miR-18a-5p mature miRNA
• Sequence: 31 - UAAGGUGCAUCUAGUGCAGAUAG - 53
• Evidence: not_experimental

Mature spn-miR-18a-3p

• Accession: MIMAT0077438
• Description: Sphenodon punctatus spn-miR-18a-3p mature miRNA
• Sequence: 72 - ACUGCCCUAAGUGCUCCUUCUGGC - 95
• Evidence: not_experimental

References