miRBase entry: spn-mir-16b

Stem-loop spn-mir-16b


Accession
MI0049754
Description
Sphenodon punctatus spn-mir-16b precursor miRNA


Sequence


ucccacgcagauguucuuguccgcaugcugUAGCAGCACGUAAAUACUGGAGuacgggaucgccuagacucuCCAGUAUUGCAUUGCUGCUUUAguuuggcuggaucuuggugacaacagcagg
......((.(.((((((.((((((..((((.(((((((....((((((((((...(((....))).....))))))))))....))))))).))))...)).))))...)).)))).).))...

Structure
ucccac  a a    -  --u    -  -au    U       CGUA          --uac   a 
      gc g uguu cu   gucc gc   gcug AGCAGCA    AAUACUGGAG     ggg u
      || | |||| ||   |||| ||   |||| |||||||    ||||||||||     |||  
      cg c acag gg   uagg cg   ugAU UCGUCGU    UUAUGACCuc     ucc c
---gga  a a    u  uuc    u  guu    U       UACG          ucaga   g 


Annotation confidence Not enough data
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Genome context
QEPC01011901.1: 25030450-25030513 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from spn-mir-16b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature spn-miR-16b-5p

Accession MIMAT0077443
Description Sphenodon punctatus spn-miR-16b-5p mature miRNA
Sequence 31 - UAGCAGCACGUAAAUACUGGAG - 52
Evidence not_experimental

Mature spn-miR-16b-3p

Accession MIMAT0077444
Description Sphenodon punctatus spn-miR-16b-3p mature miRNA
Sequence 73 - CCAGUAUUGCAUUGCUGCUUUA - 94
Evidence not_experimental

References