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miRBase |
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Stem-loop sequence osa-MIR1863b |
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Accession | MI0013050 (change log) | |||||
Description | Oryza sativa miR1863b stem-loop | |||||
Gene family | MIPF0000932; MIR1863 | |||||
Literature search |
3 open access papers mention osa-MIR1863b | |||||
Stem-loop |
----- u c c c c - -------a a aaugaau uuau caauccccugcugcuaggagcuguagcucucggggcaguaccuaauccgcugcugaucuguuucuagucaugaaaagcacugugaucug 5' caa ag aaugcaucaguua guuuc ua auaguua caugguaucagagcuga auccu aacc gu ccagcac u ||| || ||||||||||||| ||||| || ||||||| ||||||||||||||||| ||||| |||| || ||||||| a 3' guu uc uuacguagucggu cagag au ugucaau guaccauagucucgauu uagga uugg ca gguugug a caaag u a u - u u gucgauuc g ---gguu ucuc uuuagguagugacuaauaacguagugacaguccagugcuuagguugcuaccgguaucuuaacccguuuugguaccguacgucguucgug |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence osa-miR1863b |
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Accession | MIMAT0013836 |
Sequence |
304 - agcucugauaccauguuaacuguu - 327 |
Deep sequencing | 433 reads, 2 experiments |
Evidence | experimental; Illumina [1] |
Mature sequence osa-miR1863b.2 |
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Accession | MIMAT0020950 |
Sequence |
329 - agagacuuggcugaugcauuacu - 351 |
Deep sequencing | 145 reads, 2 experiments |
Evidence | experimental; Illumina [2] |
Database links |
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References |
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1 |
PMID:19903869
"Rice MicroRNA effector complexes and targets"
Plant Cell. 21:3421-3435(2009).
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2 |
PMID:21525786
"Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus"
RNA Biol. 8:538-547(2011).
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