Stem-loop cqu-mir-2941-1

Accession

MI0013622

Description

Culex quinquefasciatus cqu-mir-2941-1 precursor miRNA

Gene family

MIPF0000842; mir-2941

Literature search

1 open access papers mention cqu-mir-2941-1
(11 sentences)

Sequence

uaccCGUGGUGUUUAGUCGUAGUGCauugguuuuuagaacugUAGUACGGCUAGAACUCCACGGaua
...((((((.(((((((((((.((((...((((...)))))))).))))))).)))).))))))...

Structure

uac      U    -       G    uug    u 
   cCGUGG GUUU AGUCGUA UGCa   guuu  
   |||||| |||| ||||||| ||||   |||| u
   GGCACC CAAG UCGGCAU AUgu   caag  
aua      U    A       G    ---    a 

Annotation confidence Not enough data

Genome context

supercont3.5: 753640-753706 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from cqu-mir-2941-1

Mature cqu-miR-2941-1-5p

• Accession: MIMAT0014434
• Description: Culex quinquefasciatus cqu-miR-2941-1-5p mature miRNA
• Sequence: 5 - CGUGGUGUUUAGUCGUAGUGC - 25
• Evidence: experimental ; Illumina [1]

Mature cqu-miR-2941-3p

• Accession: MIMAT0014435
• Description: Culex quinquefasciatus cqu-miR-2941-3p mature miRNA
• Sequence: 43 - UAGUACGGCUAGAACUCCACGG - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20167119
   Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
   Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
   BMC Genomics (2010) 11:119