miRBase entry: pma-let-7a-2

Stem-loop pma-let-7a-2


Accession
MI0017145
Description
Petromyzon marinus pma-let-7a-2 precursor miRNA
Gene family
MIPF0000002; let-7


Sequence

ugagugcgcccugggaUGAGGUAGUAGGUUGUAUAGUUucagggucacacccaaacugggaguuaacuguacaaucuacucucuuucccaaggcggcacgcug
...(((((((.(((((.((((.((((((((((((((((...((((...)))).((((...)))))))))))))))))))).))))))))).))).))))....

Structure
-uga    -   c     U    U                ---------uca    c 
    gugc gcc uggga GAGG AGUAGGUUGUAUAGUU            gggu  
    |||| ||| ||||| |||| ||||||||||||||||            |||| a
    cacg cgg acccu uucu ucaucuaacaugucaa            ccca  
gucg    g   a     -    c                uugagggucaaa    c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pma-let-7a

Accession MIMAT0019564
Description Petromyzon marinus pma-let-7a mature miRNA
Sequence 17 - UGAGGUAGUAGGUUGUAUAGUU - 38
Evidence experimental
454 [1]

References

  1. PubMed ID: 20959416
    microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
    "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
    "Proc Natl Acad Sci U S A (2010) 107:19379-19383