Stem-loop sequence hco-mir-43

Accession

MI0020012 (change log)

Description

Haemonchus contortus miR-43 stem-loop

Literature search

1 open access papers mention hco-mir-43
(12 sentences)

Stem-loop

   ----acuuauuc     uc  -     a        ua     u     gc u 
5'             gcuga  uu cuugc acccgaug  gcugu auacu  c c
               |||||  || ||||| ||||||||  ||||| |||||  | g
3'             cgacu  ag gaacg uggguuac  ugaca uauga  g u
   cccaguuacguu     cu  c     c        ug     c     au u 

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Database links

• miRBase Tracker:MI0020012

Mature sequence hco-miR-43

• Accession: MIMAT0023336
• Sequence: 58 - uaucacagugucauugggucgca - 80
• Evidence: experimental; Illumina [1]

References

1. PMID:22216965 "Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel" Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C BMC Genomics. 13:4(2012).