miRBase entry: der-mir-2498a

Stem-loop der-mir-2498a

Accession

MI0030916

Description

Drosophila erecta der-mir-2498a precursor miRNA

Sequence

UUAAGUCUGUUAUGCAUAGUUUugugaguuugacaaAAUCUGCACAACCGGCUUAAUGUa
(((((((.(((.((((..(((((((.......))))))).)))).))).)))))))....

Structure

----       U   A    UA       ga 
    UUAAGUC GUU UGCA  GUUUugu  g
    ||||||| ||| ||||  |||||||  u
    AAUUCGG CAA ACGU  UAAaaca  u
aUGU       C   C    -C       gu

Annotation confidence Not enough data

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Genome context

scaffold_4845: 10618951-10619010 [-]

Clustered miRNAs

14 other miRNAs are < 10 kb from der-mir-2498a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature der-miR-2498a-5p

Accession	MIMAT0039194
Description	Drosophila erecta der-miR-2498a-5p mature miRNA
Sequence	1 - UUAAGUCUGUUAUGCAUAGUUU - 22
Evidence	experimental Illumina [1]

Mature der-miR-2498a-3p

Accession	MIMAT0039195
Description	Drosophila erecta der-miR-2498a-3p mature miRNA
Sequence	37 - AAUCUGCACAACCGGCUUAAUGU - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250