miRBase entry: hsa-mir-7-3

Stem-loop hsa-mir-7-3


Accession
MI0000265
Symbol
HGNC: MIR7-3
Description
Homo sapiens hsa-mir-7-3 precursor miRNA
Gene family
MIPF0000022; mir-7

Summary
Caution, this is an AI generated summary based on literature. This may have errors. ?

MIR7-3 is a gene that encodes a mature miRNA called miR-7 [PMC7918072]. It is one of the three genes, along with MIR7-1 and MIR7-2, that produce mature miR-7 [PMC7918072]. MIR7-3 is located on chromosome 19q13 [PMC7918072]. In a study screening for mutations in miRNA genes related to the hypothalamus-pituitary-gonadal system, no mutations were found in MIR7-3 in patients with normosmic congenital hypogonadotropic hypogonadism (ncHH) [PMC6479198]. The expression of miR-7 in the human pituitary is mainly attributed to MIR7-3, which is located within the intron of the pituitary-specific gene PGSF1 (also known as MIR7-3HG) [PMC6479198] [PMC4600152]. The expression of miR-7 derives from three separate loci in the human genome: MIR7-1, MIR7-2, and MIR  73] [PMC6479198] [PMC4600152]. In humans, mature miR-  73] expression levels are enriched in various regions of the brain, particularly the pituitary gland [PMC4600152].

Literature search
335 open access papers mention hsa-mir-7-3
(2059 sentences)

Sequence

948403 reads, 6734 reads per million, 159 experiments
agauuagaguggcuguggucuagugcugugUGGAAGACUAGUGAUUUUGUUGUUcugauguacuacgacaacaagucacagccggccucauagcgcagacucccuucgac
......(((.((....(((((.((((((((.((..(.((.(((((((.((((((.((......)).))))))))))))))).)..)).))))))))))))))).)))...

Structure
agauua   u  cugu     a        U  AA A  A       U      c  au 
      gag gg    ggucu gugcugug GG  G CU GUGAUUU GUUGUU ug  g
      ||| ||    ||||| |||||||| ||  | || ||||||| |||||| ||   
      cuu cc    ucaga cgcgauac cc  c ga cacugaa caacag au  u
---cag   c  ----     -        u  gg c  -       -      c  ca 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1]. Expression of the excised miR has been validated in zebrafish, and the 5' end mapped by PCR. Expression in human was later verified by cloning [1,2].

Genome context
chr19: 4770670-4770779 [+]

Disease association
hsa-mir-7-3 is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-7-5p

Accession MIMAT0000252
Description Homo sapiens hsa-miR-7-5p mature miRNA
Sequence 31 - UGGAAGACUAGUGAUUUUGUUGUU - 54
Evidence experimental
cloned [2-3]
Database links
Predicted targets

References

  1. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414

  2. PubMed ID: 17616659
    Patterns of known and novel small RNAs in human cervical cancer
    "Lui WO, Pourmand N, Patterson BK, Fire A"
    "Cancer Res (2007) 67:6031-6043

  3. PubMed ID: 12624257
    Vertebrate microRNA genes
    "Lim LP, Glasner ME, Yekta S, Burge CB, Bartel DP"
    "Science (2003) 299:1540