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miRBase |
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Stem-loop sequence mmu-mir-219a-1 |
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Accession | MI0000702 (change log) | |||||
Symbol | MGI:Mir219a-1 | |||||
Description | Mus musculus miR-219a-1 stem-loop | |||||
Gene family | MIPF0000044; mir-219 | |||||
Literature search |
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47 open access papers mention mmu-mir-219a-1 | |||||
Stem-loop |
---------ccguccc c cu u a a ucu 5' gggc gcggcuc gau gucca acgcaauucucg guc g |||| ||||||| ||| ||||| |||||||||||| ||| g 3' cccg cgccgag cug caggu ugcguugagagc cgg c gggggagcuccaaacc c cc - c - ccu |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence mmu-miR-219a-5p |
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Accession | MIMAT0000664 |
Previous IDs | mmu-miR-219 |
Sequence |
21 - ugauuguccaaacgcaauucu - 41 |
Deep sequencing | 56690 reads, 91 experiments |
Evidence | experimental; Illumina [3-4] |
Database links |
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Predicted targets |
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Mature sequence mmu-miR-219a-1-3p |
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Accession | MIMAT0017055 |
Previous IDs | mmu-miR-219-3p* |
Sequence |
62 - agaguugcgucuggacgucccg - 83 |
Deep sequencing | 8711 reads, 86 experiments |
Evidence | experimental; Illumina [5] |
Database links |
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Predicted targets |
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References |
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1 |
PMID:12624257
"Vertebrate microRNA genes"
Science. 299:1540(2003).
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2 |
PMID:15634332
"New human and mouse microRNA genes found by homology search"
FEBS J. 272:59-73(2005).
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3 |
PMID:17604727
"A mammalian microRNA expression atlas based on small RNA library sequencing"
Cell. 129:1401-1414(2007).
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4 |
PMID:20215419
"MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing"
Mol Hum Reprod. 16:463-471(2010).
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5 |
PMID:20413612
"Mammalian microRNAs: experimental evaluation of novel and previously annotated genes"
Genes Dev. 24:992-1009(2010).
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