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miRBase |
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Stem-loop sequence gga-mir-19b |
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Accession | MI0001180 (change log) | |||||||||||||
Description | Gallus gallus miR-19b stem-loop | |||||||||||||
Gene family | MIPF0000011; mir-19 | |||||||||||||
Literature search |
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9 open access papers mention gga-mir-19b | |||||||||||||
Stem-loop |
cuc - - uc --u 5' cacuguu ugguuaguuuugca gg uuugca cagc guau ||||||| |||||||||||||| || |||||| |||| ||| g 3' gugacgg gucagucaaaacgu cc aaacgu gucg caua --u a u -- ucu |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence gga-miR-19b-5p |
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Accession | MIMAT0026496 |
Sequence |
16 - aguuuugcagguuugcauccagc - 38 |
Deep sequencing | 37 reads, 5 experiments |
Evidence | experimental; Illumina [3] |
Predicted targets |
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Mature sequence gga-miR-19b-3p |
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Accession | MIMAT0001110 |
Sequence |
54 - ugugcaaauccaugcaaaacuga - 76 |
Deep sequencing | 26848 reads, 5 experiments |
Evidence | experimental; cloned [2], Illumina [3] |
References |
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1 |
PMID:15592404
"Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution"
Nature. 432:695-716(2004).
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2 |
PMID:18256158
"MicroRNA profile of Marek's disease virus-transformed T-cell line MSB-1: predominance of virus-encoded microRNAs"
J Virol. 82:4007-4015(2008).
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3 |
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Unpublished.
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4 |
PMID:18256158
"MicroRNA profile of Marek's disease virus-transformed T-cell line MSB-1: predominance of virus-encoded microRNAs"
J Virol. 82:4007-4015(2008).
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5 |
PMID:23034410
"Birth and expression evolution of mammalian microRNA genes"
Genome Res. 23:34-45(2013).
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