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miRBase |
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Stem-loop sequence gga-mir-106 |
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Accession | MI0001210 (change log) | |||||||||||||
Description | Gallus gallus miR-106 stem-loop | |||||||||||||
Gene family | MIPF0000001; mir-17 | |||||||||||||
Literature search |
5 open access papers mention gga-mir-106 | |||||||||||||
Stem-loop |
u a ug -aa c g g -a 5' cc ug gu ugc aagugcuua a ugcag uag gcu || || || ||| ||||||||| | ||||| ||| || c 3' gg gc ca acg uucacgaau u acguc auc cga u - gu guc a g - ca |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence gga-miR-106-5p |
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Accession | MIMAT0001142 |
Sequence |
14 - aaaagugcuuacagugcaggua - 35 |
Deep sequencing | 68720 reads, 5 experiments |
Evidence | experimental; cloned [2], Illumina [3] |
Database links |
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Predicted targets |
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Mature sequence gga-miR-106-3p |
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Accession | MIMAT0026517 |
Sequence |
49 - acugcaguauaagcacuucugg - 70 |
Deep sequencing | 450 reads, 5 experiments |
Evidence | experimental; Illumina [3] |
Predicted targets |
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References |
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1 |
PMID:15592404
"Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution"
Nature. 432:695-716(2004).
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2 |
PMID:18256158
"MicroRNA profile of Marek's disease virus-transformed T-cell line MSB-1: predominance of virus-encoded microRNAs"
J Virol. 82:4007-4015(2008).
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3 |
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Unpublished.
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4 |
PMID:18256158
"MicroRNA profile of Marek's disease virus-transformed T-cell line MSB-1: predominance of virus-encoded microRNAs"
J Virol. 82:4007-4015(2008).
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5 |
PMID:23034410
"Birth and expression evolution of mammalian microRNA genes"
Genome Res. 23:34-45(2013).
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