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miRBase |
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Stem-loop sequence gga-mir-34a |
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Accession | MI0001251 (change log) | ||||
Description | Gallus gallus miR-34a stem-loop | ||||
Gene family | MIPF0000039; mir-34 | ||||
Literature search |
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16 open access papers mention gga-mir-34a | ||||
Stem-loop |
--g -- - ug uu - a --gug a 5' ccagc ugug ag uuucu ggcagugu cuu gcugguuguu agc a ||||| |||| || ||||| |||||||| ||| |||||||||| ||| 3' gguug acac uc gaaga ccgucaua gaa cgacuaacga uug u ccg uu a gu uc u - aggaa a |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence gga-miR-34a-5p |
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Accession | MIMAT0001173 |
Sequence |
21 - uggcagugucuuagcugguuguu - 43 |
Deep sequencing | 4067 reads, 5 experiments |
Evidence | experimental; cloned [2], Illumina [3] |
Database links |
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Predicted targets |
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Mature sequence gga-miR-34a-3p |
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Accession | MIMAT0026535 |
Sequence |
64 - caaucagcaaguauacugcccua - 86 |
Deep sequencing | 47 reads, 5 experiments |
Evidence | experimental; Illumina [3] |
Predicted targets |
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References |
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1 |
PMID:15592404
"Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution"
Nature. 432:695-716(2004).
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2 |
PMID:18256158
"MicroRNA profile of Marek's disease virus-transformed T-cell line MSB-1: predominance of virus-encoded microRNAs"
J Virol. 82:4007-4015(2008).
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3 |
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Unpublished.
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4 |
PMID:18256158
"MicroRNA profile of Marek's disease virus-transformed T-cell line MSB-1: predominance of virus-encoded microRNAs"
J Virol. 82:4007-4015(2008).
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5 |
PMID:23034410
"Birth and expression evolution of mammalian microRNA genes"
Genome Res. 23:34-45(2013).
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