miRBase entry: dre-mir-219-2

Stem-loop dre-mir-219-2


Accession
MI0001385
Description
Danio rerio dre-mir-219-2 precursor miRNA
Gene family
MIPF0000044; mir-219

Literature search
7 open access papers mention dre-mir-219-2
(23 sentences)

Sequence

798 reads, 96 reads per million, 6 experiments
UGAUUGUCCAAACGCAAUUCUUgugaaaugucgagcgaucagucgagaauugugccuggacaucuguugcuggaggcucc
.(((.(((((..(((((((((((......(((....)))....)))))))))))..))))))))....(((...)))...

Structure
---------------U   U     AA           ugaaau   g 
                GAU GUCCA  CGCAAUUCUUg      guc a
                ||| |||||  |||||||||||      |||  
                cua caggu  guguuaagagc      uag g
ccucggaggucguugu   -     cc           --ugac   c 


Annotation confidence Not enough data
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Genome context
chr5: 65101371-65101450 [+]

Database links

Mature dre-miR-219-5p

Accession MIMAT0001286
Description Danio rerio dre-miR-219-5p mature miRNA
Sequence 1 - UGAUUGUCCAAACGCAAUUCUU - 22
Evidence experimental
cloned [1]
Database links
Predicted targets

References

  1. PubMed ID: 12624257
    Vertebrate microRNA genes
    "Lim LP, Glasner ME, Yekta S, Burge CB, Bartel DP"
    "Science (2003) 299:1540

  2. PubMed ID: 15937218
    The developmental miRNA profiles of zebrafish as determined by small RNA cloning
    "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
    "Genes Dev (2005) 19:1288-1293