Stem-loop sequence gma-MIR156e

Accession

MI0001771 (change log)

Description

Glycine max miR156e stem-loop

Gene family

MIPF0000008; MIR156

Literature search

40 open access papers mention gma-MIR156e
(162 sentences)

Stem-loop

   ---a     u -uu  u    cugc           -         u  u  -   a    -  gaa 
5'     ggagg g   gg gaug    ugacagaagau agagagcac ga ga uga augc au   a
       ||||| |   || ||||    ||||||||||| ||||||||| || || ||| |||| ||    
3'     ccucc c   uc cuac    acugucuucug ucucucgug uu cu acu uacg ua   g
   cucc     - ucu  -    ---u           a         u  c  c   c    g  agg 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Glycine_max_v2.0; GCA_000004515.3): chr18: 57144436-57144559 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0001771

Mature sequence gma-miR156e

• Accession: MIMAT0001673
• Sequence: 21 - cugacagaagauagagagcac - 41
• Evidence: experimental; Illumina [2]

References

1. "Conservation and divergence of microRNA families in plants" Dezulian T, Palatnik JF, Huson DH, Weigel D http://genomebiology.com/2005/6/11/p13 (2005).
2. PMID:25747880 "Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean" Zhao M, Meyers BC, Cai C, Xu W, Ma J Plant Cell. 27:546-562(2015).