Accession
MI0001785
Description
Glycine max
gma-MIR396a precursor miRNA
Gene family
MIPF0000047;
MIR396
Literature search
26 open access papers mention gma-MIR396a
(241 sentences)
(241 sentences)
Sequence
ucauggcucucuuuguauucUUCCACAGCUUUCUUGAACUGcauccaaagaguuccuuugcaugcaugccauggcacucuuacucccaaaucuuguuuugcggUUCAAUAAAGCUGUGGGAAGauacagauagggucaac
...(((((((.((((((((.((((((((((((.((((((((((..((((((((.((...(((....)))...)).)))))............)))...)))))))))).)))))))))))).)))))))).)))))))..
...(((((((.((((((((.((((((((((((.((((((((((..((((((((.((...(((....)))...)).)))))............)))...)))))))))).)))))))))))).)))))))).)))))))..
Structure
uca c c C -uc ------------ u uuu u uggcucu uuuguauu UUCCACAGCUUU UUGAACUGca caa agagu cc gca g ||||||| |||||||| |||||||||||| |||||||||| ||| ||||| || ||| acuggga agacauaG AGGGUGUCGAAA AACUUggcgu guu ucuca gg cgu c -ca u A U uuu cuaaacccucau c uac a
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
chr13: 27525230-27525369 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from gma-MIR396a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature gma-miR396a-5p
| Accession | MIMAT0001687 |
| Description | Glycine max gma-miR396a-5p mature miRNA |
| Sequence | 21 - UUCCACAGCUUUCUUGAACUG - 41 |
| Evidence |
experimental
454 [1], Northern [1], Illumina [3] |
Mature gma-miR396a-3p
| Accession | MIMAT0020922 |
| Description | Glycine max gma-miR396a-3p mature miRNA |
| Sequence | 104 - UUCAAUAAAGCUGUGGGAAG - 123 |
| Evidence |
experimental
Illumina [3] |
References
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