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miRBase |
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Stem-loop sequence zma-MIR394a |
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Accession | MI0001794 (change log) | ||||
Description | Zea mays miR394a stem-loop | ||||
Gene family | MIPF0000100; MIR394 | ||||
Literature search |
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8 open access papers mention zma-MIR394a | ||||
Stem-loop |
-- c uga g - u c ucucgccgaucuu --a u 5' gg gcuuac a aguucc uuggca u uguccaccucc gcagaa g u || |||||| | |||||| |||||| | ||||||||||| |||||| | 3' uc cggaug u ucgagg aaccgu a acggguggagg ugucuu c u cc - --- g u c u -uuuuuuuuacgu gac a |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence zma-miR394a-5p |
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Accession | MIMAT0001696 |
Previous IDs | zma-miR394a |
Sequence |
21 - uuggcauucuguccaccucc - 40 |
Deep sequencing | 841 reads, 130 experiments |
Evidence | experimental; Illumina [2] |
Mature sequence zma-miR394a-3p |
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Accession | MIMAT0015162 |
Previous IDs | zma-miR394a* |
Sequence |
90 - aggugggcauacugccaaug - 109 |
Deep sequencing | 519 reads, 142 experiments |
Evidence | experimental; Illumina [2] |
References |
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1 |
"Conservation and divergence of microRNA families in plants"
http://genomebiology.com/2005/6/11/p13 (2005).
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2 |
PMID:19936050
"A genome-wide characterization of microRNA genes in maize"
PLoS Genet. 5:e1000716(2009).
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