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miRBase |
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Stem-loop sequence zma-MIR395c |
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Accession | MI0001798 (change log) | |||||||||
Previous IDs | zma-MIR395d | |||||||||
Description | Zea mays miR395c stem-loop | |||||||||
Gene family | MIPF0000016; MIR395 | |||||||||
Literature search |
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18 open access papers mention zma-MIR395c | |||||||||
Stem-loop |
ucuug uucu c c g - - ------------c a cgg 5' guugg c cuuggaguucc u caaacacuucac c agcuagg cau gugc c ||||| | ||||||||||| | |||||||||||| | ||||||| ||| |||| 3' cgacc g ggaucucaagg a guuugugaagug g ucgaucc gua cacg c -guaa uauu u - g u a acuagucuauguu a uuc |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence zma-miR395c-5p |
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Accession | MIMAT0015165 |
Previous IDs | zma-miR395c* |
Sequence |
23 - guucccugcaaacacuucacca - 44 |
Deep sequencing | 1 reads, 1 experiments |
Evidence | by similarity; MI0001035 |
Mature sequence zma-miR395c-3p |
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Accession | MIMAT0001700 |
Previous IDs | zma-miR395d;zma-miR395c |
Sequence |
99 - gugaaguguuuggaggaacuc - 119 |
Deep sequencing | 363 reads, 120 experiments |
Evidence | by similarity; MI0001035 |
References |
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1 |
"Conservation and divergence of microRNA families in plants"
http://genomebiology.com/2005/6/11/p13 (2005).
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2 |
PMID:19936050
"A genome-wide characterization of microRNA genes in maize"
PLoS Genet. 5:e1000716(2009).
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