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miRBase |
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Stem-loop sequence zma-MIR399b |
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Accession | MI0001804 (change log) | ||||
Description | Zea mays miR399b stem-loop | ||||
Gene family | MIPF0000015; MIR399 | ||||
Literature search |
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23 open access papers mention zma-MIR399b | ||||
Stem-loop |
guagcu --gc ca ug c u -- u ga gc 5' cagggu gaau cag cagcucuccu uggca g aaggcug gaga g a |||||| |||| ||| |||||||||| ||||| | ||||||| |||| | 3' gucccg cuua guc gucgagagga accgu c uuccggu cuuu c u ---aac auua cc cu a c cg - aa ag |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Database links |
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Mature sequence zma-miR399b-5p |
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Accession | MIMAT0015171 |
Previous IDs | zma-miR399b* |
Sequence |
23 - gugcagcucuccucuggcaug - 43 |
Deep sequencing | 593 reads, 4 experiments |
Evidence | experimental; Illumina [2] |
Database links |
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Mature sequence zma-miR399b-3p |
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Accession | MIMAT0001706 |
Previous IDs | zma-miR399b |
Sequence |
83 - ugccaaaggagagcuguccug - 103 |
Deep sequencing | 342 reads, 116 experiments |
Evidence | experimental; Illumina [2] |
Database links |
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References |
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1 |
"Conservation and divergence of microRNA families in plants"
http://genomebiology.com/2005/6/11/p13 (2005).
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2 |
PMID:19936050
"A genome-wide characterization of microRNA genes in maize"
PLoS Genet. 5:e1000716(2009).
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