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miRBase |
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Stem-loop sequence zma-MIR166l |
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Accession | MI0001841 (change log) | ||||
Description | Zea mays miR166l stem-loop | ||||
Gene family | MIPF0000004; MIR166 | ||||
Literature search |
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33 open access papers mention zma-MIR166l | ||||
Stem-loop |
aaagaa - a cu g a cuuagguguuaaagcauuauauu 5' cgggag g ggguuu ggaauggag cuggucc agauc g |||||| | |||||| ||||||||| ||||||| ||||| 3' gcccuc c cccaaa ccuuacuuc gaccagg ucuag c --caca g a cu g c aguuuguguuuuggucuuuguuc |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Database links |
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Mature sequence zma-miR166l-5p |
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Accession | MIMAT0015203 |
Previous IDs | zma-miR166l* |
Sequence |
24 - gaauggaggcugguccaaga - 43 |
Deep sequencing | 342 reads, 122 experiments |
Evidence | experimental; Illumina [2] |
Mature sequence zma-miR166l-3p |
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Accession | MIMAT0001743 |
Previous IDs | zma-miR166l |
Sequence |
98 - ucggaccaggcuucauuccuc - 118 |
Deep sequencing | 154958 reads, 196 experiments |
Evidence | experimental; Illumina [2] |
Database links |
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References |
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1 |
"Conservation and divergence of microRNA families in plants"
http://genomebiology.com/2005/6/11/p13 (2005).
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2 |
PMID:19936050
"A genome-wide characterization of microRNA genes in maize"
PLoS Genet. 5:e1000716(2009).
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