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miRBase |
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Stem-loop sequence zma-MIR160f |
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Accession | MI0001848 (change log) | ||||
Description | Zea mays miR160f stem-loop | ||||
Gene family | MIPF0000032; MIR160 | ||||
Literature search |
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21 open access papers mention zma-MIR160f | ||||
Stem-loop |
- aagauag u c - u - cac 5' gagguga ggaauaugccuggc cc uguaugcc gc cgca uggcuac c ||||||| |||||||||||||| || |||||||| || |||| ||||||| 3' cucuauu uuuuguacggaccg gg gcgugcgg cg gcgu gcuggug g c --aauaa u a u - u ucc |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence zma-miR160f-5p |
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Accession | MIMAT0001750 |
Previous IDs | zma-miR160f |
Sequence |
21 - ugccuggcucccuguaugccg - 41 |
Deep sequencing | 624 reads, 5 experiments |
Evidence | experimental; Illumina [2] |
Mature sequence zma-miR160f-3p |
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Accession | MIMAT0015209 |
Previous IDs | zma-miR160f* |
Sequence |
79 - gcgugcgaggugccaggcaug - 99 |
Deep sequencing | 139 reads, 121 experiments |
Evidence | experimental; Illumina [2] |
References |
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1 |
"Conservation and divergence of microRNA families in plants"
http://genomebiology.com/2005/6/11/p13 (2005).
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2 |
PMID:19936050
"A genome-wide characterization of microRNA genes in maize"
PLoS Genet. 5:e1000716(2009).
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