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miRBase |
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Stem-loop sequence ptc-MIR319d |
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Accession | MI0002299 (change log) | ||||
Description | Populus trichocarpa miR319d stem-loop | ||||
Gene family | MIPF0000010; MIR159 | ||||
Literature search |
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8 open access papers mention ptc-MIR319d | ||||
Stem-loop |
a ug u ca cu cg c uu - g ac u aa aca ga g 5' a guu aa gagcuuccuucagucca caugga gg gaagggu ggauuag cu ccg ucauucau ca cacaguag ag gu g | ||| || ||||||||||||||||| |||||| || ||||||| ||||||| || ||| |||||||| || |||||||| || || 3' u uaa uu cucgagggaagucaggu gugucu uc uuuccua uuuaauu ga ggc aguaagug gu guguuauc uc cg c - gu u cc uc cu u -c a g gc u aa --g gg a |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence ptc-miR319d |
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Accession | MIMAT0002005 |
Sequence |
165 - uuggacugaagggagcuccc - 184 |
Evidence | experimental; cloned [1] |
References |
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1 |
PMID:15994906
"Novel and mechanical stress-responsive MicroRNAs in Populus trichocarpa that are absent from Arabidopsis"
Plant Cell. 17:2186-2203(2005).
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2 |
"Conservation and divergence of microRNA families in plants"
http://genomebiology.com/2005/6/11/p13 (2005).
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3 |
PMID:16973872
"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)"
Science. 313:1596-1604(2006).
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