miRBase entry: mmu-mir-677

Stem-loop mmu-mir-677


Accession
MI0004634
Symbol
MGI: Mir677
Description
Mus musculus mmu-mir-677 precursor miRNA
Gene family
MIPF0000811; mir-677

Literature search
3 open access papers mention mmu-mir-677
(6 sentences)

Sequence

4409 reads, 109 reads per million, 98 experiments
gagccUUCAGUGAUGAUUAGCUUCUGAcuuucguucuucugaauuugcuGAAGCCAGAUGCCGUUCCUGAGAAGGgga
...(((((((.((((....((.((((.((((.((((....))....)).)))).)))).)))))).))))..)))...

Structure
gag   --    U    AUUA  U    A    c  ----  u 
   ccU  UCAG GAUG    GC UCUG cuuu gu    uc u
   |||  |||| ||||    || |||| |||| ||    ||  
   GGA  AGUC UUGC    CG AGAC GAAG cg    ag c
agg   AG    C    ----  U    C    u  uuua  u 


Annotation confidence Not enough data
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Genome context
chr10: 128085286-128085363 [+]

Database links

Mature mmu-miR-677-5p

Accession MIMAT0003451
Description Mus musculus mmu-miR-677-5p mature miRNA
Sequence 6 - UUCAGUGAUGAUUAGCUUCUGA - 27
Evidence experimental
MPSS [1], Illumina [2]
Database links
Predicted targets

Mature mmu-miR-677-3p

Accession MIMAT0017246
Description Mus musculus mmu-miR-677-3p mature miRNA
Sequence 50 - GAAGCCAGAUGCCGUUCCUGAGAAGG - 75
Evidence experimental
454 [3]
Database links
Predicted targets

References

  1. PubMed ID: 20215419
    MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
    "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
    "Mol Hum Reprod (2010) 16:463-471

  2. PubMed ID: 20668074
    Identification and analysis of expression of novel microRNAs of murine gammaherpesvirus 68
    "Zhu JY, Strehle M, Frohn A, Kremmer E, Hofig KP, Meister G, Adler H"
    "J Virol (2010) 84:10266-10275

  3. PubMed ID: 16582102
    The expression profile of microRNAs in mouse embryos
    "Mineno J, Okamoto S, Ando T, Sato M, Chono H, Izu H, Takayama M, Asada K, Mirochnitchenko O, Inouye M, Kato I"
    "Nucleic Acids Res (2006) 34:1765-1771