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miRBase |
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Stem-loop sequence sme-mir-10b |
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Accession | MI0005140 (change log) | ||||
Previous IDs | sme-mir-10 | ||||
Description | Schmidtea mediterranea miR-10b stem-loop | ||||
Literature search |
1 open access papers mention sme-mir-10b | ||||
Stem-loop |
au ga c u c g -- -- ugu 5' cugucaccg cu acc ug agau cga uuugauu aaugc caa u ||||||||| || ||| || |||| ||| ||||||| ||||| ||| g 3' gauaguggu ga ugg ac ucua gcu aaacuaa uuacg guu a -c ag a u a a cu aa uug |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence sme-miR-10b-3p |
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Accession | MIMAT0003974 |
Previous IDs | sme-miR-10*;sme-miR-10b* |
Sequence |
76 - ucgaaucuucaaggugaa - 93 |
Evidence | experimental; cloned [1], 454 [2], Illumina [2-3] |
References |
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1 |
PMID:16849698
"MicroRNAs from the Planarian Schmidtea mediterranea: a model system for stem cell biology"
RNA. 12:1640-1649(2006).
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2 |
PMID:19564616
"High-resolution profiling and discovery of planarian small RNAs"
Proc Natl Acad Sci U S A. 106:11546-11551(2009).
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3 |
PMID:19553344
"Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea"
RNA. 15:1483-1491(2009).
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