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miRBase |
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Stem-loop sequence sme-mir-12 |
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Accession | MI0005141 (change log) | ||||
Description | Schmidtea mediterranea miR-12 stem-loop | ||||
Literature search |
1 open access papers mention sme-mir-12 | ||||
Stem-loop |
auuuu auc c c uu u aaau ag 5' aucc gcu a ugagua cuaucaggag cgaa gcguua u |||| ||| | |||||| |||||||||| |||| |||||| u 3' uagg cga u auucau gguaguucuc gcuu ugcaau a -uuuu aaa a a uu u ---- ca |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence sme-miR-12-5p |
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Accession | MIMAT0003975 |
Previous IDs | sme-miR-12 |
Sequence |
19 - ugaguauucuaucaggagucga - 40 |
Evidence | experimental; cloned [1], 454 [2], Illumina [2-3] |
Mature sequence sme-miR-12-3p |
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Accession | MIMAT0012100 |
Previous IDs | sme-miR-12* |
Sequence |
67 - cgucucuugaugguuuacuuaau - 89 |
Evidence | experimental; 454 [2], Illumina [2-3] |
References |
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1 |
PMID:16849698
"MicroRNAs from the Planarian Schmidtea mediterranea: a model system for stem cell biology"
RNA. 12:1640-1649(2006).
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2 |
PMID:19564616
"High-resolution profiling and discovery of planarian small RNAs"
Proc Natl Acad Sci U S A. 106:11546-11551(2009).
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3 |
PMID:19553344
"Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea"
RNA. 15:1483-1491(2009).
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