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miRBase |
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Stem-loop sequence sme-mir-31a |
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Accession | MI0005145 (change log) | ||||
Description | Schmidtea mediterranea miR-31a stem-loop | ||||
Literature search |
1 open access papers mention sme-mir-31a | ||||
Stem-loop |
uuuua a uuaa c a a caac g 5' uuguu uguu gg aag uguuggc uaacuga aauuc a ||||| |||| || ||| ||||||| ||||||| ||||| 3' aacaa acga cc uuc acgauug auugacu uuagg a ----a a uaga a - c uuaa a |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence sme-miR-31a-5p |
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Accession | MIMAT0003979 |
Previous IDs | sme-miR-31a |
Sequence |
19 - aggcaagauguuggcauaacuga - 41 |
Evidence | experimental; cloned [1], Northern [1], 454 [2], Illumina [2] |
Mature sequence sme-miR-31a-3p |
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Accession | MIMAT0012104 |
Previous IDs | sme-miR-31a* |
Sequence |
65 - caguuacguuagcacuuacca - 85 |
Evidence | experimental; Illumina [2-3] |
References |
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1 |
PMID:16849698
"MicroRNAs from the Planarian Schmidtea mediterranea: a model system for stem cell biology"
RNA. 12:1640-1649(2006).
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2 |
PMID:19564616
"High-resolution profiling and discovery of planarian small RNAs"
Proc Natl Acad Sci U S A. 106:11546-11551(2009).
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3 |
PMID:19553344
"Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea"
RNA. 15:1483-1491(2009).
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