Stem-loop sequence sme-mir-755

AccessionMI0005181 (change log)
DescriptionSchmidtea mediterranea miR-755 stem-loop
Stem-loop 
   -uuuc      -    cu    u       c    u 
5'      uguagu ggag  auug auuucac gugg u
        |||||| ||||  |||| ||||||| ||||  
3'      gcauca ccuc  uaac uagagug uauc g
   auuua      a    au    u       c    g
Get sequence
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (WUSTL3.1) Overlapping transcripts
Contig1078: 22802-22873 [+]
intergenic
Clustered miRNAs
< 10kb from sme-mir-755
sme-mir-750Contig1078: 22657-22761 [+]
sme-mir-755Contig1078: 22802-22873 [+]
Database links

Mature sequence sme-miR-755-5p

Accession MIMAT0004022
Previous IDssme-miR-755
Sequence

10 -  

uggagcuauuguauuucacc

 - 29

Get sequence
Evidence experimental; cloned [1], Northern [1], 454 [2], Illumina [2]

Mature sequence sme-miR-755-3p

Accession MIMAT0012126
Sequence

43 -  

gugagauucaauuacuccaacuac

 - 66

Get sequence
Evidence experimental; 454 [2], Illumina [2-3]

References

1
PMID:16849698 "MicroRNAs from the Planarian Schmidtea mediterranea: a model system for stem cell biology" Palakodeti D, Smielewska M, Graveley BR RNA. 12:1640-1649(2006).
2
PMID:19564616 "High-resolution profiling and discovery of planarian small RNAs" Friedlander MR, Adamidi C, Han T, Lebedeva S, Isenbarger TA, Hirst M, Marra M, Nusbaum C, Lee WL, Jenkin JC, Sanchez Alvarado A, Kim JK, Rajewsky N Proc Natl Acad Sci U S A. 106:11546-11551(2009).
3
PMID:19553344 "Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea" Lu YC, Smielewska M, Palakodeti D, Lovci MT, Aigner S, Yeo GW, Graveley BR RNA. 15:1483-1491(2009).