Stem-loop tae-MIR1130a

Accession

MI0006192

Description

Triticum aestivum tae-MIR1130a precursor miRNA

Literature search

5 open access papers mention tae-MIR1130a
(12 sentences)

Sequence

2671 reads, 39 reads per million, 116 experiments

aaaugucuuauacucCCUCCGUCUCGUAAUGUAAGACGuuuuuauaagcuauguuagucuguaaaaaaaagucuuugcaaaaacgucuuacauuaugggacggagugguaguauuugcaacg
...((.(..(((((((((((((((((((((((((((((((((.....((((...)))).((((((........)))))))))))))))))))))))))))))))).)).)))))..)))...

Structure

aaa  u uu     -  -                          uauaagcuauguuaguc      aaa 
   ug c  auacu cC CUCCGUCUCGUAAUGUAAGACGuuuu                 uguaaa   a
   || |  ||||| || ||||||||||||||||||||||||||                 ||||||    
   ac g  uauga gg gaggcaggguauuacauucugcaaaa                 acguuu   a
gca  - uu     u  u                          -----------------      cug 

Annotation confidence Not enough data

Comments

Yao et al. misname this sequence miR514 in [1]. miR1130 is unrelated to mammalian miR-514;

Genome context

Unknown

Mature tae-miR1130a

• Accession: MIMAT0005365
• Description: Triticum aestivum tae-miR1130a mature miRNA
• Sequence: 16 - CCUCCGUCUCGUAAUGUAAGACG - 38
• Evidence: experimental ; cloned [1], Northern [1]

References

1. PubMed ID: 17543110
   Cloning and characterization of microRNAs from wheat (Triticum aestivum L.)
   Yao Y, Guo G, Ni Z, Sunkar R, Du J, Zhu JK, Sun Q
   Genome Biol (2007) 8:R96