miRBase entry: mmu-mir-466l

Stem-loop mmu-mir-466l


Accession
MI0006278
Symbol
MGI: Mir466l
Description
Mus musculus mmu-mir-466l precursor miRNA
Gene family
MIPF0000316; mir-467

Literature search
24 open access papers mention mmu-mir-466l
(58 sentences)

Sequence

74 reads, 19 reads per million, 25 experiments
cuauguaugugcauguguguUUGUGUGUACAUGUACAUGUAUauauauauugauauacaUAUAAAUACAUGCACACAUAUUcaugcaugcacacgcacacauuaauggcacucuuagaucc
...(((.((((((((((((..(((((((.((((((..(((((.(((((....))))).)))))..)))))).)))))))..)))))))))))).)))........................

Structure
---------------------cua   a            uU       A      CA     a     a 
                        ugu ugugcaugugug  UGUGUGU CAUGUA  UGUAU uauau u
                        ||| ||||||||||||  ||||||| ||||||  ||||| |||||  
                        acg acacguacguac  AUACACA GUACAU  AUAUa auaua u
ccuagauucucacgguaauuacac   c            UU       C      AA     c     g 


Annotation confidence High
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Genome context
chr2: 10516097-10516217 [+]
Clustered miRNAs
17 other miRNAs are < 10 kb from mmu-mir-466l
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-466l-5p

Accession MIMAT0017322
Description Mus musculus mmu-miR-466l-5p mature miRNA
Sequence 21 - UUGUGUGUACAUGUACAUGUAU - 42
Evidence experimental
454 [2], Illumina [3]

Mature mmu-miR-466l-3p

Accession MIMAT0005830
Description Mus musculus mmu-miR-466l-3p mature miRNA
Sequence 60 - UAUAAAUACAUGCACACAUAUU - 81
Evidence experimental
454 [1], Illumina [3]
Database links
Predicted targets

References

  1. PubMed ID: 20413612
    Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
    "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
    "Genes Dev (2010) 24:992-1009

  2. PubMed ID: 20668074
    Identification and analysis of expression of novel microRNAs of murine gammaherpesvirus 68
    "Zhu JY, Strehle M, Frohn A, Kremmer E, Hofig KP, Meister G, Adler H"
    "J Virol (2010) 84:10266-10275

  3. PubMed ID: 17989215
    RNA sequence analysis defines Dicer's role in mouse embryonic stem cells
    "Calabrese JM, Seila AC, Yeo GW, Sharp PA"
    "Proc Natl Acad Sci U S A (2007) 104:18097-18102