Stem-loop sequence aga-mir-981

Accession

MI0008307 (change log)

Description

Anopheles gambiae miR-981 stem-loop

Gene family

MIPF0000710; mir-981

Literature search

3 open access papers mention aga-mir-981
(5 sentences)

Stem-loop

         -    gau         c    u    u    ----------   ga 
5' gccuua ucug   cggguuucg uggc aacg guug          ugc  g
   |||||| ||||   ||||||||| |||| |||| ||||          |||   
3' cggaau aggc   guccaaagc gcug uugc uaac          acg  c
         g    -ac         a    -    u    uucaaaaaaa   ag 

Confidence

Annotation confidence: not enough data

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Comments

This mature miRNA was cloned from Anopheles stepheni, and mapped to the A. gambiae genome [1].

Genome context

• Coordinates (AgamP3; GCA_000005575.1): chrX: 1228287-1228381 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0008307

Mature sequence aga-miR-981

• Accession: MIMAT0007857
• Sequence: 63 - uucguugucgacgaaaccug - 82
• Evidence: not experimental

References

1. PMID:18500992 "Cloning, characterization, and expression of microRNAs from the Asian malaria mosquito, Anopheles stephensi" Mead EA, Tu Z BMC Genomics. 9:244(2008).