miRBase entry: bta-mir-124b

Stem-loop bta-mir-124b


Accession
MI0009726
Description
Bos taurus bta-mir-124b precursor miRNA
Gene family
MIPF0000021; mir-124

Literature search
8 open access papers mention bta-mir-124b
(10 sentences)

Sequence

168 reads, 13 reads per million, 50 experiments
ugagggccccucugcguguucacagcggaccuugauuuaaugucuauacaauUAAGGCACGCGGUGAAUGCCAAGagaggcgccucc
.(((((((.((((..((((((((.(((..((((((((............))))))))..))).))))))))..)))).))).)))).

Structure
u    -   c    gc        a   ga        uaaug 
 gagg gcc cucu  guguucac gcg  ccuugauu     u
 |||| ||| ||||  |||||||| |||  ||||||||      
 cucc cgg gaGA  CGUAAGUG CGC  GGAAUuaa     c
c    g   a    AC        G   AC        cauau 


Annotation confidence Not enough data
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Comments
This sequence was mis-named bta-mir-104-3 in [1].

Genome context
chr13: 55046824-55046910 [-]

Database links

Mature bta-miR-124b

Accession MIMAT0013774
Description Bos taurus bta-miR-124b mature miRNA
Sequence 53 - UAAGGCACGCGGUGAAUGCCAAG - 75
Evidence experimental
cloned [2], Array [3], qRT-PCR [3]

References

  1. PubMed ID: 17105755
    Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
    "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
    "Physiol Genomics (2007) 29:35-43

  2. PubMed ID: 19170227
    Identification and expression profiling of microRNAs during bovine oocyte maturation using heterologous approach
    "Tesfaye D, Worku D, Rings F, Phatsara C, Tholen E, Schellander K, Hoelker M"
    "Mol Reprod Dev (2009) 76:665-677

  3. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125