miRBase entry: bta-mir-24-1

Stem-loop bta-mir-24-1


Accession
MI0009761
Description
Bos taurus bta-mir-24-1 precursor miRNA
Gene family
MIPF0000041; mir-24

Literature search
24 open access papers mention bta-mir-24-1
(51 sentences)

Sequence

65437 reads, 551 reads per million, 74 experiments
cuccgGUGCCUACUGAGCUGAUAUCAGUucucauuuuacacacuggcucaguucagcaggaacaggag
((((.((.(((.(((((((((..(((((.............))))).))))))))).))).)).))))

Structure
    g  G   A         UA     ucuca 
cucc GU CCU CUGAGCUGA  UCAGU     u
|||| || ||| |||||||||  |||||     u
gagg ca gga gacuugacu  gguca     u
    a  a   c         -c     cacau 


Annotation confidence High
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Genome context
chr8: 83484370-83484437 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from bta-mir-24-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-24

Accession MIMAT0009250
Description Bos taurus bta-miR-24 mature miRNA
Sequence 6 - GUGCCUACUGAGCUGAUAUCAGU - 28
Evidence experimental
cloned [2]

References

  1. PubMed ID: 19758457
    Characterization of bovine miRNAs by sequencing and bioinformatics analysis
    Jin W, Grant JR, Stothard P, Moore SS, Guan LL
    BMC Mol Biol (2009) 10:90

  2. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125