miRBase entry: bta-mir-30f

Stem-loop bta-mir-30f


Accession
MI0009795
Description
Bos taurus bta-mir-30f precursor miRNA
Gene family
MIPF0000005; mir-30

Literature search
17 open access papers mention bta-mir-30f
(103 sentences)

Sequence

10376 reads, 368 reads per million, 77 experiments
gagggccagauacUGUAAACACCCUACACUCUCAGCUgugcacagugagaaagcugggagaaggcuguuuacucucucugccuu
.(((((.(((....(((((((.(((...(((((((((..............))))))))).))).)))))))....))))))))

Structure
g     c   uacU       C   ACA         gugcac 
 agggc aga    GUAAACA CCU   CUCUCAGCU      a
 ||||| |||    ||||||| |||   |||||||||       
 uuccg ucu    cauuugu gga   gagggucga      g
-     -   cucu       c   --a         aagagu 


Annotation confidence Not enough data
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Genome context
chr9: 10781518-10781601 [-]

Database links

Mature bta-miR-30f

Accession MIMAT0009282
Description Bos taurus bta-miR-30f mature miRNA
Sequence 14 - UGUAAACACCCUACACUCUCAGCU - 37
Evidence experimental
cloned [2]

References

  1. PubMed ID: 19758457
    Characterization of bovine miRNAs by sequencing and bioinformatics analysis
    Jin W, Grant JR, Stothard P, Moore SS, Guan LL
    BMC Mol Biol (2009) 10:90

  2. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125