Stem-loop bta-mir-32

Accession

MI0009796

Description

Bos taurus bta-mir-32 precursor miRNA mir-32

Gene
family

RF00666; mir-32

Literature search

7 open access papers mention bta-mir-32
(11 sentences)

Sequence

8996 reads, 117 reads per million, 74 experiments

ggaggUAUUGCACAUGACUAAGUUGCAUguugucacggccucagugcaauuuaguaugugugauauuuuc
((((((((((((((((.(((((((((((((((...))))....)))))))))))))))))))))))))))

Structure

                A           ----    u 
ggaggUAUUGCACAUG CUAAGUUGCAU    guug  
|||||||||||||||| |||||||||||    |||| c
cuuuuauaguguguau gauuuaacgug    cggc  
                -           acuc    a 

Annotation confidence High

Genome context

chr8: 100883622-100883691 [-]

Mature bta-miR-32

• Accession: MIMAT0009283
• Description: Bos taurus bta-miR-32 mature miRNA
• Sequence: 6 - UAUUGCACAUGACUAAGUUGCAU - 28
• Evidence: experimental ; cloned [3]

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 19758457
   Characterization of bovine miRNAs by sequencing and bioinformatics analysis
   Jin W, Grant JR, Stothard P, Moore SS, Guan LL
   BMC Mol Biol (2009) 10:90


3. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125