miRBase entry: bta-mir-324

Stem-loop bta-mir-324


Accession
MI0009798
Description
Bos taurus bta-mir-324 precursor miRNA
Gene family
MIPF0000165; mir-324

Literature search
2 open access papers mention bta-mir-324
(5 sentences)

Sequence

1016 reads, 26 reads per million, 66 experiments
aacuggcuaugccucccCGCAUCCCCUAGGGCAUUGGUGUaaagcuggagacccacugccccaggugcugcuggggguuguagucugac
....(((((((.(((((.(((.(.(((.(((((.(((.((..........))))).))))).))).).))).))))).)))))))....

Structure
aacu       c     C   U C   A     U   U  aaag 
    ggcuaug cuccc GCA C CCU GGGCA UGG GU    c
    ||||||| ||||| ||| | ||| ||||| ||| ||     
    cugaugu ggggg cgu g gga cccgu acc ca    u
cagu       u     u   c u   c     c   -  gagg 


Annotation confidence High
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Genome context
chr19: 27713361-27713449 [-]

Database links

Mature bta-miR-324

Accession MIMAT0009285
Description Bos taurus bta-miR-324 mature miRNA
Sequence 18 - CGCAUCCCCUAGGGCAUUGGUGU - 40
Evidence experimental
cloned [3]

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39

  2. PubMed ID: 19758457
    Characterization of bovine miRNAs by sequencing and bioinformatics analysis
    Jin W, Grant JR, Stothard P, Moore SS, Guan LL
    BMC Mol Biol (2009) 10:90

  3. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125