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miRBase |
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Stem-loop sequence bta-mir-362 |
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Accession | MI0009811 (change log) | |||||||||||||
Description | Bos taurus miR-362 stem-loop | |||||||||||||
Gene family | MIPF0000209; mir-362 | |||||||||||||
Literature search |
4 open access papers mention bta-mir-362 | |||||||||||||
Stem-loop |
cuc acc -a ug 5' gaauccuugga uaggugug g cugu ||||||||||| |||||||| | ||| u 3' cuuaggaacuu auccacac c gauc aaa --- aa gu |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
Mature sequence bta-miR-362-5p |
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Accession | MIMAT0009298 |
Previous IDs | bta-miR-362 |
Sequence |
5 - aauccuuggaaccuaggugugagu - 28 |
Deep sequencing | 705 reads, 73 experiments |
Evidence | experimental; cloned [4] |
Predicted targets |
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Mature sequence bta-miR-362-3p |
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Accession | MIMAT0012548 |
Sequence |
42 - aacacaccuauucaaggauuc - 62 |
Deep sequencing | 233 reads, 64 experiments |
Evidence | experimental; cloned [3-4] |
Predicted targets |
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References |
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1 |
PMID:18215311
"miRNAminer: a tool for homologous microRNA gene search"
BMC Bioinformatics. 9:39(2008).
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2 |
PMID:18945293
"Annotation of 390 bovine miRNA genes by sequence similarity with other species"
Anim Genet. 40:125(2009).
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3 |
PMID:19267191
"Identification and characteristics of cattle microRNAs by homology searching and small RNA cloning"
Biochem Genet. 47:329-343(2009).
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4 |
PMID:19758457
"Characterization of bovine miRNAs by sequencing and bioinformatics analysis"
BMC Mol Biol. 10:90(2009).
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